Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs874001 chr6:168979841 C/T 0.000183 283 25.95 26.7 18.2 KM Plot
KIRP rs874532 chr1:3581961 C/G 5.55E-9 289 5.37 26.07 25.82 KM Plot
KIRP rs882993 chr10:43186186 C/T 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs883085 chr8:616590 T/A 2.01E-11 283 26.37 21.8 8.6 KM Plot
KIRP rs897791 chr19:16490859 A/G 0.000157 285 12.1 20.9 26 KM Plot
KIRP rs905212 chr5:156457572 A/G 9.9E-8 284 12.78 23.68 26.28 KM Plot
KIRP rs911942 chr6:169050237 T/G 0.000111 276 22.75 27.05 22.88 KM Plot
KIRP rs9257140 chr6:28727121 G/A 2.9E-8 281 25.57 26.37 9.77 KM Plot
KIRP rs9257167 chr6:28741734 C/A 3.02E-8 280 25.6 24.98 9.77 KM Plot
KIRP rs9278063 chr6:28734987 CAA/C 2.9E-8 281 25.57 26.37 9.77 KM Plot
KIRP rs929069 chr16:976554 G/A 0.000107 285 26.63 26.37 14.83 KM Plot
KIRP rs9294924 chr6:169271933 G/C 1.37E-5 283 25.82 25.57 10 KM Plot
KIRP rs9294926 chr6:169272064 C/T 1.37E-5 283 25.82 25.57 10 KM Plot
KIRP rs9310491 chr3:16037656 T/G 8.0E-5 288 20.4 26 25.65 KM Plot
KIRP rs9311330 chr3:42953329 A/G 1.89E-5 288 26.37 22.57 21.17 KM Plot